Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVAPGANAHLT-----PVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTH-------------------FVITLGVRGARYVGADGVFE-VPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
4XDA Chain:A ((4-261)) | ------------MNKLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQADVGFIACVGDDSFGINIRESFKLDGINTAGVKLQPNCPTGIAMIQVSDSGENSICISAEANAKLTAAAIEPDLAAIRDARYLLMQLETPLDGILKAAQEAKTAKTNVILNPAPA---RELPDELLKCVDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITLGSKGV-WLSQNGRGQRIPGFVVKATDTTAAGDTFNGAL-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112866 for 1940 contacts (-58.2/contact) +
2D Compatibility (PS) -27013 + (NN) -18360 + (LL) 3632
1D Compatibility (HY) -11600 + (ID) 4400
Total energy: -170607.0 ( -87.94 by residue)
QMean score : 0.453
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