Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALRRRHEPDGWPFSQRSEKPNAVRHAVRCSAVSAAASTANGTPVNWVSGRVTRAMGVHRQTRGGVASVHADSLRGAVLVHGQLRNSIPISANVPASGANTKSSIAH
1NRZ Chain:A ((12-18))
------------------------------------------------------------------------------LIHGQVT----------------------
General information:
TITO was launched using:
RESULT:
Template:
1NRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 548 for 16 contacts (34.2/contact) +
2D Compatibility (PS) -646 + (NN) 1131 + (LL) 5240
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 4873.0 ( 304.56 by residue)
QMean score : -0.088
(partial model without unconserved sides chains):
PDB file :
Tito_1NRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NRZ-query.scw
PDB file :
Tito_Scwrl_1NRZ.pdb
: