Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGV--IPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGG-PTSAPIYASIDDNPSY--------EQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVND----GLGSYFWQHNWGSPK--GY--THPAAHLHQVEIDKRKVGGV--GVDVNQILKPQFGQWA |
| 1JFX Chain:A ((4-204)) | -------------------------------------GVQGIDVSHWQGSINWSSVKSAGMSFAYIKATEGTN----YKDDR-FSANYTNAYNAGIIR-GAYHFARPNA-------SSGTAQADYFASNGGGWSRDNRTLPGVLDIEHNPSGAMCYGLSTTQMRTWINDFHARYKAR-TTRDVVIYTTASWWNTCTGSWNGMAAKSPFWVAHWGV-SAPTVPSGFPTWTFWQYSAT-GRVGGVSGDVDRNKFNG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54054 for 1485 contacts (-36.4/contact) +
2D Compatibility (PS) -18861 + (NN) -5757 + (LL) 3400
1D Compatibility (HY) -1200 + (ID) 1650
Total energy: -78122.0 ( -52.61 by residue)
QMean score : 0.435
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