Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYGRGARMTFERDAVTVLSGIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISIGASAPYEGPPPRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGVVEAVALGLPVGLGSFTSGDHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPISTVPRALATVDLATGDEAVAIHQRSDVCAVPAAGVVVETMVALVLARAALEKFGGDSLAETQRNIAAYQRSVADREAPAARVSG |
4LJ2 Chain:A ((9-340)) | LFRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQKS------------K-----------------------------RDYRGG-GRSSARETAMRVAAGAIAKKYLAEKFGVLIRGHVTQIGNEV------AEKLDWNEVPNNPFFCGDVDAVPRFEALVTSLREQGTSCGAKLEILAEKVPVGWGEPVF--DRLDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELT--SHGFL--ANHAGGILGGISSGQTIRVAIALKPTASIT-----------------KGRHDPCVGVRATPIAEAMLAIVL--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155177 for 2211 contacts (-70.2/contact) +
2D Compatibility (PS) -31047 + (NN) -10744 + (LL) 5856
1D Compatibility (HY) -16800 + (ID) 5550
Total energy: -213462.0 ( -96.55 by residue)
QMean score : 0.416
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