Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGG---FGPEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG-----HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVD-----LGTRVGVATRFCAFDSGGLADAVAAAEVLVSTIPAEVAAGY-------AGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD |
| 1NVT Chain:A ((12-281)) | -----KVIGLIGHPVEHSFSPIMHNAAFKDKGLN-YVYVAFDVLPENLKYVIDGAKALG--IVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYNTDGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVD-----LDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168533 for 2063 contacts (-81.7/contact) +
2D Compatibility (PS) -26537 + (NN) -7574 + (LL) 468
1D Compatibility (HY) -18000 + (ID) 3750
Total energy: -223926.0 ( -108.54 by residue)
QMean score : 0.414
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