Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
4GCY Chain:A ((21-174))
MSTTLAIVRLDPGLPLPSRAWDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
General information:
TITO was launched using:
RESULT:
Template:
4GCY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83277 for 970 contacts (-85.9/contact) +
2D Compatibility (PS) -16973 + (NN) -7607 + (LL) 0
1D Compatibility (HY) -20000 + (ID) 7650
Total energy: -135507.0 ( -139.70 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_4GCY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GCY-query.scw
PDB file :
Tito_Scwrl_4GCY.pdb
: