Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
3GLX Chain:A ((6-226))
-----DTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELG-------VPGT--RVIDAATSMPRKVRIVQINEIFQVKTDQFTQLLDADIRVGSEVEI-VDRD-HITLSH---KDVELLDDLAHTIRIEEL
General information:
TITO was launched using:
RESULT:
Template:
3GLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98419 for 1550 contacts (-63.5/contact) +
2D Compatibility (PS) -23774 + (NN) -16604 + (LL) 448
1D Compatibility (HY) -19600 + (ID) 6200
Total energy: -164149.0 ( -105.90 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_3GLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GLX-query.scw
PDB file :
Tito_Scwrl_3GLX.pdb
: