Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLAL-------TSSQWDITDPAAAERIIR--HGDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVY--TGGTGKDFVAVM-RRLAAGHGRVDVVDDQTGSPTYVADLAEALLALA-----DAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSS----AQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 4KTT Chain:E ((21-286)) | ----NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFD----GTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQ-MTKYEMACAIADAFNLPSSHLRPITDSPVL-QRPRNA-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117134 for 1987 contacts (-59.0/contact) +
2D Compatibility (PS) -27120 + (NN) -14833 + (LL) 3420
1D Compatibility (HY) -14800 + (ID) 3850
Total energy: -174317.0 ( -87.73 by residue)
QMean score : 0.560
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