Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTCPCESSERNEPVSRVSGTNEVSDGNETNNPAEVSDGNETNNPAEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVTEKPLHPHEPHIEILRGQPTDQELAALIAVLGSISGSTPPAQPEPTRWGLPVDQLRYPVFSWQRITLQEMTHMRR |
1G6U Chain:A ((14-33)) | ---------------------------------------------------------------------------------------------------------------------KEGFSPEELAALESELQALE---------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2369 for 71 contacts (-33.4/contact) +
2D Compatibility (PS) -2374 + (NN) -4189 + (LL) 3588
1D Compatibility (HY) -800 + (ID) 300
Total energy: -6444.0 ( -90.76 by residue)
QMean score : 0.435
|
|
|