Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTI--MSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP |
4J94 Chain:A ((39-82)) | -----------------------------------------------------------------------------------------------------------------------------------TGPDQPTEQRKICATPTVMPNSNFADRPWANDYLRIQEAQKFAT------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 58 for 118 contacts (0.5/contact) +
2D Compatibility (PS) -4218 + (NN) -612 + (LL) 8076
1D Compatibility (HY) 800 + (ID) 200
Total energy: 3904.0 ( 33.08 by residue)
QMean score : -0.032
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