Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHYYSVDTIRAAEAPLLASLPDGALMRRAAFGLATEIGRELTARTGGVVGRRVCAVVGSGDNGGDALWAATFLRRRGAAADAVLLNPDRTHRKALAAFTKSGGRLVE----SVSAATDLVIDGVVGISGSGPLRPAAAQVFAAVQAAAIPVVAVDIPSGIDVATGAITGPAVHAALTVTFGGLKPVHALAD----CGRVVLVDIGLDLAHTDVLG-FEATDVAARWPVPG-PRDD-KYTQGVTGVLAGSSTYPGAAVLCTGAAVAATSGMVRYAGTAHAEVLA--HWPEVIASPTPAAAG---------------RVQAWVVGPGLGTDEAGAAALWFALDT-DLPVLVDADGLTMLADHPDLVAGRNAPTVLTPHAGEFARLAGAPPGDDRVGA--CRQLADALGATVLLKGNVTVIADPGGPVYLNPAGQSWAATAGSGDVLSGMIGALLASGLPSGEAAAAAAFVHARASAAAAADPGPGDAPTSASRISGHIRAALAAL |
| 3RTD Chain:A ((93-480)) | ---------------------------------------------------------------------------------------PDCEYNYGL--YKKFGGKVVEQFEPSILNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSGIDSNTGKVLRTAVKADLTVTFGVPKIGHILFPGRDLTGKLKVANIGHPVHLINSINRYVITREMVRSLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAINVL--DTSVLKERKSPAVLTPHPGEMARLVKKTVGDVKYNYELAEEFAKENDCVLVLKSATTIVTD-GEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHGFAAELFEQD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217328 for 2956 contacts (-73.5/contact) +
2D Compatibility (PS) -40703 + (NN) -29198 + (LL) 6996
1D Compatibility (HY) -22400 + (ID) 6050
Total energy: -308683.0 ( -104.43 by residue)
QMean score : 0.426
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