Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGF-RAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1WA4 Chain:A ((1-194))
MQARKLAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVFSYMASRSYVTQDELALSALDPALGL--PIDIGVEPIVSDRDRVAITLAEAQRQGLLPDYTTSQEI-------
General information:
TITO was launched using:
RESULT:
Template:
1WA4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101273 for 1586 contacts (-63.9/contact) +
2D Compatibility (PS) -20783 + (NN) -11158 + (LL) 404
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -152560.0 ( -96.19 by residue)
QMean score : 0.772
(partial model without unconserved sides chains):
PDB file :
Tito_1WA4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WA4-query.scw
PDB file :
Tito_Scwrl_1WA4.pdb
: