Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVL--GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKVPADRVVQRLADNGILAIANTG----SRVLDVLGVND--VGGAVTVGLAHYSTMAEVD---QLVRALASLG |
| 3LVJ Chain:A ((59-393)) | ---------------------------------------------------SHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKK-GKHIITSKTEHKA-VLDTCRQLEREGFEVTYLAPQ-RNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVR------------RKPRVRIEAQMHGGGHERGMRSGTLP-VHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWN----GIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKD---LAVSSG-SLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219144 for 2649 contacts (-82.7/contact) +
2D Compatibility (PS) -35413 + (NN) -21752 + (LL) 4024
1D Compatibility (HY) -18400 + (ID) 4100
Total energy: -294785.0 ( -111.28 by residue)
QMean score : 0.552
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