Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEILVTGGAGFQGSHLTESLLANGH------WVTVLDKSSRNAVR-NMQGFRSHDRAAFISGSVTDGQTIDRAVRDHHVVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLE-AVRRYRNRLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAYNLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGA---RIEHRDARPGEVQRFPAD-ISLAKSIGFQPQVEIWDGIDRYINWAKDQPQYPYEQDGFSGSSVL |
| 1R66 Chain:A ((1-314)) | MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTDEVYG---SIDSGS-WTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEK---LIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL-AGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173929 for 2633 contacts (-66.1/contact) +
2D Compatibility (PS) -32315 + (NN) -7994 + (LL) 344
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -239244.0 ( -90.86 by residue)
QMean score : 0.528
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