Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGGTWDLFRYPGIRSDSDMYTLGFRF-----RPWTGRQAIADGKPILEYVKSTAAMYGIDRHIRFHHKVISADWSTAENRWTVHIQSHGTLSALTCEFLFLCSGYYNYDEGYSPRFAGSEDFVGPIIHPQHWP-EDLDYDAKNIVVIGSGATAVTLVPALADSGAKHVTMLQRSPTYIVSQPDRDG--------------------------------------------IAEKLNRWLPETMAYTAVRWKNVLRQAAVYSACQKWPRRMRKMFL---SLIQRQLPEGYDVRKHFGPHYNPWDQRLCL-VPNGDLFRAIRHGKVEVVTDTIERFTATGIRLNSGRELPADIIITATGLNLQLFGGATATIDGQQVDITTTM--------AYKGMMLSGIPNMAYTVGYTNASWTLKADLVS-----EFVCRLLNYMDDNGFDTVVVERPGSDVEERPFMEFTPGYVLRSLDELPKQGSRTPWRLNQNYLRDIRLIRRGKIDDEGLRFAKRPAPVGV |
| 2YLS Chain:A ((15-469)) | --EEVDVLVVGAGFSGLYALYRLRELG--RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHG--DRIRARYLIMASGQLSVPQ--LPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAE-LFVFQRTPHFAV--PARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYP----FG------TKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVR-TSEREYELDSLVLATGFD--ALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS-ALSNMLVSIEQHVEWVTDHIAYMFKNGL--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242282 for 3155 contacts (-76.8/contact) +
2D Compatibility (PS) -40475 + (NN) -7222 + (LL) 5556
1D Compatibility (HY) -28000 + (ID) 6000
Total energy: -318423.0 ( -100.93 by residue)
QMean score : 0.381
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