Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
3Q0V Chain:A ((42-234))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAE-----DRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
3Q0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106184 for 1354 contacts (-78.4/contact) +
2D Compatibility (PS) -20552 + (NN) -15507 + (LL) 992
1D Compatibility (HY) -24800 + (ID) 9400
Total energy: -175451.0 ( -129.58 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0V-query.scw
PDB file :
Tito_Scwrl_3Q0V.pdb
: