Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSLLILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPH-----GPDDGCD--CRKPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLG---KPLPEGTLIFDDLAAVASALLQ
2O2X Chain:A ((34-211))
-----LFLDRDGTINVDTD-YPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLGRD
General information:
TITO was launched using:
RESULT:
Template:
2O2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96352 for 1321 contacts (-72.9/contact) +
2D Compatibility (PS) -19381 + (NN) -15972 + (LL) 352
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -146153.0 ( -110.64 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_2O2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O2X-query.scw
PDB file :
Tito_Scwrl_2O2X.pdb
: