Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDL-TQLPTGSVVTGQVQDLPI-DAPILQMEVVRVDAEGVGLRFLSEA
2K6W Chain:A ((73-117))
----------------------------GRVELKPGGYHFMLLGLKRPLKAGEEVELDLL-FAGGKVLKVVLPVEAR-------------
General information:
TITO was launched using:
RESULT:
Template:
2K6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9987 for 157 contacts (-63.6/contact) +
2D Compatibility (PS) -4760 + (NN) -881 + (LL) 2916
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -15862.0 ( -101.03 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_2K6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K6W-query.scw
PDB file :
Tito_Scwrl_2K6W.pdb
: