Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPPPPAPVRSQAAAPAYEAEPPVA--------ELDREQAIQFMQMLRDEGDPRSPPLGGLQPRQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSAEEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP
3NAI Chain:A ((4-81))-------------------------------------RPSGTYAGLPIADYGDAPPLSTKTMFWRTSPEKLPPGAWEPAYLGSKDERVDGPSLQQVMRDQLKPYSEPRGLLPPQEILDAVCDAIENRLENTLEPQKPWTFKKACESLDKNTSSGYPYHKQKSKDWTGSAFIGDLGDQATHANNMYEMGKSMRPIYTAALKDELVKPDK


General information:
TITO was launched using:
RESULT:

Template: 3NAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2614 for 255 contacts (10.3/contact) +
2D Compatibility (PS) -7636 + (NN) -13791 + (LL) 2604
1D Compatibility (HY) 800 + (ID) 1100
Total energy: -16509.0 ( -64.74 by residue)
QMean score : 0.338

(partial model without unconserved sides chains):
PDB file : Tito_3NAI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NAI-query.scw
PDB file : Tito_Scwrl_3NAI.pdb: