Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNT------PNSSVLN--QKTG-TANQSGYYTCIYEFFADASGRVVDATARGECR |
1BQB Chain:A ((196-266)) | --------------------------------------------------------GDALRSMSNPEQFGQPSHMKDYVYTEKDNGGVHTNSGIPNKAAYNVIQAIGKSKSEQIYYRALTEYLTSNSNFKDLKDALYQAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3947 for 261 contacts (15.1/contact) +
2D Compatibility (PS) -6290 + (NN) -196 + (LL) 4704
1D Compatibility (HY) 0 + (ID) 1000
Total energy: 1165.0 ( 4.46 by residue)
QMean score : 0.150
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