Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD |
| 1KGS Chain:A ((82-142)) | -------------------------ALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLWVFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARDE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8601 for 283 contacts (-30.4/contact) +
2D Compatibility (PS) -6478 + (NN) -776 + (LL) 2828
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -15927.0 ( -56.28 by residue)
QMean score : 0.178
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