Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYARHASRYSLFTLAVSAALLPGAGWAANGDLAGARKPPSVACSWNREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQ-GGANQFWLEAWNGRFHGS-SAGNDGIVYCPADSALPNYVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVP--ASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD |
3GIU Chain:A ((4-204)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MHILVTGFAPFDNQ----------NINPSWEAVTQLEDIIG----T--HTIDKLKLPTSFKKVDN-IIN----KTLAS--NHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPIDQ--------------------AIH-------------------------LDGAPAYFSNLPVKAMTQSII------------------------------------NQGLP---------------------GALSNSAGTFVCNHTLYHLGYLQDKHYPHLRFGFIHVPYIPEQVIGKPDTPS----------------MPLEKIVAGLTAAIEAISNDEDLHLALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67633 for 1682 contacts (-40.2/contact) +
2D Compatibility (PS) -21674 + (NN) -11023 + (LL) 17060
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -92770.0 ( -55.15 by residue)
QMean score : 0.311
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