Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPLGQPQLTVQRLSLAAHERL--DWQVHPM-PSALYVLKGELRLETRDGAQSTRVLEGEAAGCLMNIIHR-LIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA
2GU9 Chain:A ((18-100))
----------------------------------------------LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAI-VD-GHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPPAYDAQGEPLPAGE---
General information:
TITO was launched using:
RESULT:
Template:
2GU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24428 for 506 contacts (-48.3/contact) +
2D Compatibility (PS) -8110 + (NN) 2518 + (LL) 1400
1D Compatibility (HY) 1600 + (ID) 650
Total energy: -27670.0 ( -54.68 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2GU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GU9-query.scw
PDB file :
Tito_Scwrl_2GU9.pdb
: