Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTIRSYQGKTPLLGERVFVDPSAVLVGDIEIGADSSVWPLVVIRGDMHRIRIGQRSSIQDGSVLHITHAGPFNPDGFPLSIGDEVTVGHKVLLHGCSIGNRVLVGMGSIVMDGAVIEDEVILGAGSLVPPGKVLESGFLYVGSPAKKARPLSDKERGFFAYTAGNYVKLKDLHIAEDYHA
3VNP Chain:A ((3-148))--IYPYKGKTPQIAASAFIADYVTITGDVVIGEETSIWFNTVIRGDVAPTVIGNRVNIQDNSILH---QSPNNP----LIIEDGVTVGHQVILHSAIVRKNALIGMGSIILDRAEIGEGAFIGAGSLVPPGKKIPPNTLALGRPAKVVRELTEDDIREMERIRREYVEKGQYYKALQQ--


General information:
TITO was launched using:
RESULT:

Template: 3VNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -139549 for 1210 contacts (-115.3/contact) +
2D Compatibility (PS) -16506 + (NN) -9479 + (LL) 232
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -178652.0 ( -147.65 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3VNP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VNP-query.scw
PDB file : Tito_Scwrl_3VNP.pdb: