Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENI-SNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA |
2K1S Chain:A ((36-96)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------VTFDSSSAT------LKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPLLEHHHHHH------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6046 for 303 contacts (20.0/contact) +
2D Compatibility (PS) -6354 + (NN) -713 + (LL) 9248
1D Compatibility (HY) 800 + (ID) 350
Total energy: 8677.0 ( 28.64 by residue)
QMean score : 0.195
|
|
|