Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKLIVALFGLLLAACSSSPPETPPTRVVIWLHAAPNLNPSAAGQAAPLRLRLYELKKDTAFGRADYFALTDNAQSTLGGDLVEQDEFLLRP------GEERRIERTLDEQTRQLGFVAAYRDLDRATWRQV-LDVPGQRTSHLDITLGAQAIGIVARPAP
3THY Chain:A ((444-526))
---------------------------------------------------------------RSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDL-EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
General information:
TITO was launched using:
RESULT:
Template:
3THY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9448 for 351 contacts (-26.9/contact) +
2D Compatibility (PS) -8028 + (NN) -1519 + (LL) 4356
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -19939.0 ( -56.81 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_3THY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3THY-query.scw
PDB file :
Tito_Scwrl_3THY.pdb
: