Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
1TU1 Chain:A ((3-144))
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPT--
General information:
TITO was launched using:
RESULT:
Template:
1TU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60991 for 905 contacts (-67.4/contact) +
2D Compatibility (PS) -15629 + (NN) -7972 + (LL) -168
1D Compatibility (HY) -17600 + (ID) 7100
Total energy: -109460.0 ( -120.95 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_1TU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TU1-query.scw
PDB file :
Tito_Scwrl_1TU1.pdb
: