Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDAKVDTRRLVGRLLLVTVLMFAFGFALVPLYDVMCRALGINGKTAGSAYSGEQQVDVGREVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARNPSDKPMTAQAIPSIAPAE-----AAAYFHKTECFCFTQQVLQPGESIEMPVRFIVDRDLPKDVRHVTLAYTLFDITARKPPVPVAGR |
3QBT Chain:B ((38-103)) | --------------------------------------------------------------------------------------NVKFRQLQKEKFQISNNGQVPCHFS----FIPKLNDSQYCKPWLRAE----PFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHLDRGKDYFLT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12749 for 305 contacts (-41.8/contact) +
2D Compatibility (PS) -6592 + (NN) -516 + (LL) 7176
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -17181.0 ( -56.33 by residue)
QMean score : 0.143
|
|
|