Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANAGRLLEHIEIEKRWGLQ
4ERU Chain:B ((20-63))
-----TYSAEKQLTKALPKLARATSNEK---LSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEGLIE
General information:
TITO was launched using:
RESULT:
Template:
4ERU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3776 for 234 contacts (-16.1/contact) +
2D Compatibility (PS) -5242 + (NN) -4117 + (LL) 612
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -15823.0 ( -67.62 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_4ERU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ERU-query.scw
PDB file :
Tito_Scwrl_4ERU.pdb
: