Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL
2XZZ Chain:A ((-1-762))
--------------------------------MLSLT---LLGAAVVGQECEVQIVFKNPLPV--TLTNVVFRLEGSG--LQRPKILNVGDIGGNETVTLRQSFVPVRPGPRQLIASLDSPQLSQVHGVIQVDVA-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22852 for 394 contacts (-58.0/contact) +
2D Compatibility (PS) -7555 + (NN) -1400 + (LL) 3364
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -31293.0 ( -79.42 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_2XZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZZ-query.scw
PDB file :
Tito_Scwrl_2XZZ.pdb
: