Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFN---NLQEFLDLY-YAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQ------------THTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRH----------LSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQ---RVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
3MVT Chain:A ((7-332)) | --------PKVELHVHLDGAIKPETILYFGKKRGIALPADTVEELRNIIGMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPSWSLEVLELCKKYNQKTV----------VAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151550 for 2572 contacts (-58.9/contact) +
2D Compatibility (PS) -32148 + (NN) -16609 + (LL) 1632
1D Compatibility (HY) -21200 + (ID) 4500
Total energy: -224375.0 ( -87.24 by residue)
QMean score : 0.445
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