Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGS-YLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVR---RGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR |
| 4BJU Chain:A ((444-548)) | ----------------------------------------------------------------------------------------------------------------WTPKEWL----ATYTDLPSRLVRVEVAERSIFKAYDA-----------ERKLE---SPPGLQAKIDSLQSRYNKGRSFARASGTEDAVRVYAEAASRSEADDLATRVA-NAVRDAGTVKEILQA--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3003 for 631 contacts (4.8/contact) +
2D Compatibility (PS) -9900 + (NN) 3441 + (LL) 17988
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: 9532.0 ( 15.11 by residue)
QMean score : 0.089
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