Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFL-------SGFY------------------PIVMVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPLMQLAR---ALCLIGTSLFFTTGLRYLPLAEATAVNFLAPLLVTALSVPLLKEK--VSLGQ-WLAVLTGFIGVLFIVRPGGALFTPAALFPLG-SALCFGLYQLLTRM------LANSDSPTTSNFLAGIFNTLIMSL-------LVPFFWQTPSLLHGLMMIALG-GCGMGGHLLLTQAFRHAPPATLAPFSYGQIIFAGLLGLLVFGHV----PDAWALLGILVICASGLVVAWRRGR- |
| 4NTC Chain:A ((2-326)) | M--SIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATGVRDIPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVLALGPIANPARALHLARMALRLSESVTIYTNGNEQLAKEIQQAAEESPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTPPFY----ETSVP------------GVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308676 for 2161 contacts (-142.8/contact) +
2D Compatibility (PS) -28026 + (NN) 2958 + (LL) 980
1D Compatibility (HY) -2800 + (ID) 2850
Total energy: -338414.0 ( -156.60 by residue)
QMean score : 0.189
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