Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFL-KIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAG-SFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFP---NGNAAA----TPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK |
| 2V84 Chain:A ((26-314)) | ----------------------------VLYLYNWTYYTPTSLIKKFEQQYNVQVVYDDYASNEDMFAKLSIGASGYDLVVPSGDFVSIMKRKHLLEKIDLSKIPNVQFIKESVRARI-AYDPKMEYSVPYYLGAAGIAVNKKAVPSYARTWSIFSRKDLAYR-----------MSMMDDMREVMGAALASLGYNVNTKNEQELAQAAILVTDHWKPNLVKFDSDGYAKSFASGDFVVAHGFAEAFF---AETPEAMHE-HIDFFIPQDVASPVYVDSFCIPKGARNRDLAHAFINFFLEPAHYAEFLDTFGFPSTIHREAAAYQKKTPYYSEHDLERGTLKTDVGAAIEHYNAHWNAVRFR-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2V84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138731 for 2241 contacts (-61.9/contact) +
2D Compatibility (PS) -30326 + (NN) -19351 + (LL) 3980
1D Compatibility (HY) -23200 + (ID) 5000
Total energy: -212628.0 ( -94.88 by residue)
QMean score : 0.586
|
|
|