Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAADPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQALEKGKAQPFDGYIECP
3ECK Chain:A ((260-311))
--------------------------------------------DPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSWYTEASKVLDLDGNVQEIILRTDDSELEVTIG
General information:
TITO was launched using:
RESULT:
Template:
3ECK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11549 for 185 contacts (62.4/contact) +
2D Compatibility (PS) -5582 + (NN) -4976 + (LL) 3460
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 2251.0 ( 12.17 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3ECK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ECK-query.scw
PDB file :
Tito_Scwrl_3ECK.pdb
: