Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTDAKRPLQLNDQGQLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISL-NVSTSSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARSNMLALKTLGCPDIRVIAPRTL-LPIGLEEQY---GVRVF--TNADEGLKDVDVVIMLRLQRERMQGGLLPSEGEFFKLYGLTEKRLKL---AKPDAIVMHPGPINRGVEIESAVADGAQSVILNQVTYGIAIRMAVLSMAMSGQNTQRQLEQEDAE
1ML4 Chain:A ((6-305))-----------------RDVISIRDFSKEDIETVLATAER-LERELKEKGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYC-DVIVIRHPKEGAARLAAE--VAEVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEAL-TFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKER-----FPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP--RVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLGVI------------


General information:
TITO was launched using:
RESULT:

Template: 1ML4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205395 for 2496 contacts (-82.3/contact) +
2D Compatibility (PS) -32246 + (NN) -15581 + (LL) 2368
1D Compatibility (HY) -24800 + (ID) 5400
Total energy: -281054.0 ( -112.60 by residue)
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_1ML4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ML4-query.scw
PDB file : Tito_Scwrl_1ML4.pdb: