Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGSSIYLACEAIYNRAQAVIVAVGVETAETPEAQASAVIGGISAAGERTGLQALLDGKSRFNAQPRLLVAPGHSA-----QQAVATAMDGLAEKLR-AIAILDGPNSTD---------EAAVAYA----------KNFGSKRLFMVDPGVQVWDSATNAARNAPASAYAAGLFAWTDAEYGFWSSPSNK--EIKGVTGTSRPVEFLDGDETCRANLLNNANIATIIRDDGYRLWGNRTLSSDSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGAVINFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA |
| 3FOA Chain:A ((356-507)) | -----------------------------------------------------------------------------------------------------------MEAWDFFADRE---SVDVQLFIAGSCAGESLETASTVQKHVVSIGDVRQDCLVLCSPPRETVVGIPVTRAVDNLVNWRTAAGSYTDNNFNISSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNV----------RGQILNVIKLAIETP----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31575 for 806 contacts (-39.2/contact) +
2D Compatibility (PS) -12198 + (NN) -7827 + (LL) 17832
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -39218.0 ( -48.66 by residue)
QMean score : 0.248
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