Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADETELKRLYWHSRRGMLELDVLLVPFVQEVYPGLDAEDQARFRKLLECEDQDMFGWFMQRGEPEDADLRRMVRMILDRVQPD
1PUZ Chain:A ((4-81))
-FDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELSEFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA----
General information:
TITO was launched using:
RESULT:
Template:
1PUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53152 for 522 contacts (-101.8/contact) +
2D Compatibility (PS) -8551 + (NN) -9199 + (LL) 480
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -78172.0 ( -149.75 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_1PUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PUZ-query.scw
PDB file :
Tito_Scwrl_1PUZ.pdb
: