Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGG-HGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
2Z9D Chain:A ((1-179))
-SKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIP-VLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYT-ENGP---EGLVTGKKAIVITSRGGIHKDGP------TDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA-
General information:
TITO was launched using:
RESULT:
Template:
2Z9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106089 for 1329 contacts (-79.8/contact) +
2D Compatibility (PS) -20249 + (NN) -14612 + (LL) 656
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -158644.0 ( -119.37 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_2Z9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z9D-query.scw
PDB file :
Tito_Scwrl_2Z9D.pdb
: