Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQFLKLVHADKLTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDKIKPELIKLYTTNFTESELKDLNAFYQSPL-GKKVLEKMPRLTAESAQLTQAKLQGAVEPVNKLMADMDKELGVAAPAQKKK |
2B5U Chain:A ((370-435)) | ---------------------------------------------------------------------------------------------------------------------AEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13152 for 288 contacts (45.7/contact) +
2D Compatibility (PS) -7089 + (NN) -3813 + (LL) 9712
1D Compatibility (HY) 0 + (ID) 1050
Total energy: 10912.0 ( 37.89 by residue)
QMean score : 0.302
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