Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLCNVVVLISGSGSNLQALIDSLRDGATPARIRAVISNRADAYGLERARQAGIQTEVLDHKAYADRESFDEALAQRIDAHEPHLVILAGFMRILSADFVRHYQGRLLNIHPSLLPRHKGLHTHQRALEAGDREHGCSVHFVTEELDGGPLVVQAVIPVESQDTPERLARRVHEEEHRIYPLAMRWFAEGRLRLGEQGALLDGQALPATGHQIRTKEIRNA
3TQR Chain:A ((8-212))
------IVVLISGNGTNLQAIIGAIQKGLA-IEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVT-DLDAGPLICQARLSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGRLNYHNNQVFLDGKPLAKSGHAFP-------
General information:
TITO was launched using:
RESULT:
Template:
3TQR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148919 for 1636 contacts (-91.0/contact) +
2D Compatibility (PS) -23045 + (NN) -15814 + (LL) 1096
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: -215082.0 ( -131.47 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_3TQR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQR-query.scw
PDB file :
Tito_Scwrl_3TQR.pdb
: