Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKHIIARTPARSLVD-GLTSSHLGKPDYAKALEQHNAYIRALQT-CDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAGEFVSK-------PEFQDFNIIEIPEEESYAANCIWVN----ERVIM---PAGYPRTREKIARL-GYRVIEVDTSEYRKIDGGVSCMSLRF |
| 2JAJ Chain:A ((19-281)) | ---HAVVRALPESLGQHALRS--GEEVDVARAERQHQLYVGVLGSKLGLQVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAV--STVPVADGLHLKS-FCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEKLKDHMLIPVSMSELEKVDGLLTCCSVLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112938 for 2048 contacts (-55.1/contact) +
2D Compatibility (PS) -26252 + (NN) -5632 + (LL) 48
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -166874.0 ( -81.48 by residue)
QMean score : 0.604
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