Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLYNGRTEEGLPIEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAELQKHKPECWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCGAE---SGGLEEHLHGQLPPRCAACGG-VLRPPVVLFEEMLPEEAIDTLYRELR--KGFDAVLVVGTT------ASFPYIVEPVLRTRQAGGFTAEVNPGVTDLSERVDVKMTGRALDIMPQVVSHIYR
4TWJ Chain:A ((5-248))------IRKAAEILAKSKHAVVFTGAGISAE-----------------PEEV---ASISG--FKRNPRAFWEFSMEM-KDKLFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGS--RRVLELHGSMDKLDCLDCHETYDWSEFVEDFNKGEI-PRCRKCGSYYVKPRVVLFGEPLPQR---TLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYI------AKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIVEEVKR


General information:
TITO was launched using:
RESULT:

Template: 4TWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119197 for 1743 contacts (-68.4/contact) +
2D Compatibility (PS) -23600 + (NN) -14062 + (LL) 744
1D Compatibility (HY) -17200 + (ID) 4350
Total energy: -177665.0 ( -101.93 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_4TWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TWJ-query.scw
PDB file : Tito_Scwrl_4TWJ.pdb: