Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4KEH Chain:A ((3-166))
--KRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQ-----
General information:
TITO was launched using:
RESULT:
Template:
4KEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134340 for 1317 contacts (-102.0/contact) +
2D Compatibility (PS) -17186 + (NN) -8105 + (LL) 312
1D Compatibility (HY) -21600 + (ID) 5700
Total energy: -186619.0 ( -141.70 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4KEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KEH-query.scw
PDB file :
Tito_Scwrl_4KEH.pdb
: