Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIFNPNPGNTLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQKI
3ZQB Chain:A ((43-80))
---------------------------------------------DPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNI
General information:
TITO was launched using:
RESULT:
Template:
3ZQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4965 for 150 contacts (-33.1/contact) +
2D Compatibility (PS) -4007 + (NN) -2307 + (LL) 2124
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -12555.0 ( -83.70 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_3ZQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZQB-query.scw
PDB file :
Tito_Scwrl_3ZQB.pdb
: