Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGGLRLLLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRGNRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR |
3UC2 Chain:A ((30-60)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VHYNVFNSSFLQPNVASAVGLVRSKAQGVINVVPMEKGKPVEAAVTGSAKDLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8281 for 150 contacts (-55.2/contact) +
2D Compatibility (PS) -3265 + (NN) -1137 + (LL) 19928
1D Compatibility (HY) 0 + (ID) 100
Total energy: 7145.0 ( 47.63 by residue)
QMean score : 0.196
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