Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPG----LAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAH--LDASLLLERIHPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGIN-RQADGR-LVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD |
| 1A4I Chain:A ((4-294)) | --AEILNGKEISAQIRARLKNQVTQLKEQ---VPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY------KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199940 for 2365 contacts (-84.5/contact) +
2D Compatibility (PS) -29941 + (NN) -14085 + (LL) 580
1D Compatibility (HY) -28400 + (ID) 6300
Total energy: -278086.0 ( -117.58 by residue)
QMean score : 0.579
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