Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLPRAS
4FGI Chain:A ((3-149))
--SLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCS-----
General information:
TITO was launched using:
RESULT:
Template:
4FGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38005 for 1183 contacts (-32.1/contact) +
2D Compatibility (PS) -15362 + (NN) -6172 + (LL) 168
1D Compatibility (HY) -2000 + (ID) 2450
Total energy: -63821.0 ( -53.95 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_4FGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FGI-query.scw
PDB file :
Tito_Scwrl_4FGI.pdb
: