Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAE-ARLSVLYIDGKRLHISEEDAQRLVVAGAEDQRRHLMADD
2K5F Chain:A ((32-79))
---------------------LVRGAKLKVLRFAPLGDPIEVNCNGMLLTMRRNEAEGITVHILAGDEGHPHGWP
General information:
TITO was launched using:
RESULT:
Template:
2K5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1563 for 225 contacts (-6.9/contact) +
2D Compatibility (PS) -4935 + (NN) -572 + (LL) 1408
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -7162.0 ( -31.83 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_2K5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5F-query.scw
PDB file :
Tito_Scwrl_2K5F.pdb
: