Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVH-GALRGGYLGARRLLRCHPWHPGGYDPVPERQEQACACHRTAKPGK
2IF6 Chain:A ((110-126))
---------------------------QYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVSPQAVF
General information:
TITO was launched using:
RESULT:
Template:
2IF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -920 for 56 contacts (-16.4/contact) +
2D Compatibility (PS) -1780 + (NN) -956 + (LL) 2432
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -2574.0 ( -45.96 by residue)
QMean score : -0.315
(partial model without unconserved sides chains):
PDB file :
Tito_2IF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IF6-query.scw
PDB file :
Tito_Scwrl_2IF6.pdb
: